Passerelles Monteynard
SMPGD 2026: Statistical Methods for Post Genomic Data
29-30 Janvier 2026 Grenoble (France)

Program > Detailed program

Thursday, January 29, 2026

Time Event (+)
09:00 - 09:30 Registration (Galerie des amphis)  
09:30 - 09:45 Opening presentation (Amphi H of CLV) - Caroline Bazzoli  
09:45 - 11:10 Environmental omics (Amphi H of CLV) (+)  
09:45 - 10:40 › DNA studies from lake sediments: what we know and what we want to know - Laura Parducci, Sapienza - University of Rome  
11:10 - 11:45 Coffee break (Galerie des amphis)  
11:45 - 12:45 Environmental omics (Amphi H of CLV) (+)  
11:45 - 12:15 › Investigating metabolisms of microbial communities from metagenomics and metabarcoding data - Arnaud Belcour, Inria  
12:15 - 12:30 › Unsupervised detection and fitness estimation of emerging SARS-CoV-2 variants: Application to wastewater samples (ANRS0160) - Alexandra Lefebvre, Laboratoire Jacques-Louis Lions, Centre interdisciplinaire de recherche en biologie  
12:30 - 12:45 › Inference after human genetic clustering - Javier González-Delgado, Ecole Nationale de la Statistique et de l'Analyse de l'Information [Bruz] - Simon Gravel, Department of Human Genetics, McGill University  
12:45 - 14:00 Lunch break  
14:00 - 15:40 Missing values and data generation (Amphi H of CLV) - Thomas Burger (+)  
14:00 - 14:55 › Minimal Libraries and Synthetic Augmentation of CRISPR-Cas9 Screens for Drug Target Discovery - Emanuel Gonçalves, Instituto Superior Técnico (IST) - University of Lisbon  
14:55 - 15:25 › Generative methods for handling missing values - Aude Sportisse, CNRS  
15:25 - 15:40 › Inferring cellular heterogeneity with mixture models for DNA methylation rates - Hugo Barbot, Institut de Recherche Mathématique de Rennes  
15:40 - 15:50 Highlights - posters (Amphi H of CLV) - Vincent Brault (+)  
15:40 - 15:41 › Reassessing APOBEC3-signature mutation localization in MPXV shows no significant enrichment in predicted cruciform structures - Kazanov Marat, Sabanci University - Fedor Kazanov, National Research University Higher School of Economics [Moscow]  
15:41 - 15:42 › Network-based analysis of genome-wide biobank data boosts discovery of genetic associations in psoriasis - Aguirre Samboní Giann Karlo, Mines Paris - PSL (École nationale supérieure des mines de Paris)  
15:42 - 15:43 › Towards a Common Transcriptional Signature of Vaccination : Robustness of a Comparative Study of 13 Vaccines - Arthur Hughes, Univ. Bordeaux, INSERM, Inria, BPH, U1219, F-33000 Bordeaux, France, Vaccine Research Institute [Créteil, France]  
15:43 - 15:44 › Estimation of the false identification transfer rate in multi-sample proteomic analyses - Alicia Lionneton, Etude de la dynamique des protéomes  
15:44 - 15:45 › Maximum Mean Discrepancy as a Similarity Metric between experimental and theoretical spectra in proteomics - Nicola De Simone, Etude de la dynamique des protéomes  
15:45 - 15:46 › Exploring genome-wide association between chromatin structure and gene expression: a Mixture of scalar-on-function regression coupled to random forest classification - Mathilde Bruguet, Institut Agro , Irmar UMR 6625 CNRS  
15:46 - 15:47 › DeCovarT: Network-Driven Deconvolution of Transcriptomics data to reveal organoid Cellular Heterogeneity - Bastien Chassagnol, Marseille medical genetics - Centre de génétique médicale de Marseille  
15:47 - 15:48 › Cutting-edge proteomics for diagnosis and stratification of patients suffering from sepsis - Salem Al Siblani, Sciences Chimiques et Biologiques pour la Santé, Laboratoire Innovations technologiques pour la Détection et le Diagnostic  
15:48 - 15:49 › Spreading of methylation of transposable elements in A.Thaliana - Ekaterina Antonenko, Centre de Bioinformatique, Institut Curie, Oncologie Computationnelle (U1331)  
15:49 - 15:50 › Epigenetic time series analysis - Kossi julien Kowou, UMR 1388 GenPhySE  
15:50 - 17:00 Posters and Coffee break (Galerie des amphis)  
15:50 - 17:00 Posters (Galerie des amphis) (+)  
15:50 - 15:51 › On the Methodological difficulties of analyzing the association between compositional microbiome data and outcomes: An example from an HIV study. - Antonin Colajanni, Bordeaux population health, Laboratoire Bordelais de Recherche en Informatique  
15:50 - 15:51 › PangenePro: an automated pipeline for rapid identification and classification of gene family members - Kinza Fatima, University of California [Riverside] - Muhammad Tahir ul Qamar, Government College University of Faisalabad  
15:50 - 15:51 › Toward Reliable Graph Analysis: Uncertainty Quantification for fMRI Connectivity - Alice Chevaux, Laboratoire Jean Kuntzmann  
15:50 - 15:51 › How to boost omics biology research using generative artificial intelligence tools while avoiding the pitfalls of hallucinations - Thomas Burger, CEA Grenoble  
15:50 - 15:51 › Empirical simulation study for differential structure estimation of graphical models - Blanche Francheterre, Mathématiques et Informatique Appliquées  
15:50 - 15:51 › Towards off-the-grid demultiplexing of LC-MS/MS data - Gowtham Sankarananth Seenivasaharagavan, GIPSA Pôle Géométrie, Apprentissage, Information et Algorithmes, CEA Grenoble  
15:50 - 15:51 › Hierarchical Spatial Modeling of Hill-Based Soil Bacterial Diversity Across Sub-Saharan Africa Using MEM-Constrained Mixed Models - Anicet Ebou, Institut National Polytechnique Yamoussoukro  
17:00 - 17:45 Missing values and data generation (Amphi H of CLV) - Thomas Burger (+)  
17:00 - 17:30 › From Missing Intensities to Uncertainty: A Conjugate Bayesian Framework for Differential Proteomics - Marie Chion, University of Cambridge  
17:30 - 17:45 › Nucleotide-level RNA-Seq data augmentation based on a variational Bayesian framework  

Friday, January 30, 2026

Time Event (+)
09:00 - 10:40 Next generation hypothesis testing (Amphi H of CLV) - Pierre Neuvial (+)  
09:00 - 09:55 › Comparative analysis of 3D genomic data - Nathalie Vialaneix, INRAE  
09:55 - 10:25 › True discovery guarantees in differential gene expression analysis - Anna Vesely, University of Bologna  
10:25 - 10:40 › Kernel Testing for Spatially Variable Gene Detection - Lucy Attwood, Laboratoire de biologie et modélisation de la cellule  
10:40 - 11:15 Coffee break (Galerie des amphis)  
11:15 - 12:30 Next generation hypothesis testing (Amphi H of CLV) - Pierre Neuvial (+)  
11:15 - 11:30 › Statistical tests for bivariate spatial association in multi-omics data - Stijn Hawinkel, Department of Plant Biotechnology and Bioinformatics, Ghent University, VIB center for Plant Systems Biology  
11:30 - 12:00 › Composite hypothesis testing procedure for the integration of multiple GWAS summary statistics - Annaïg De Walsche, Institut Pasteur  
12:00 - 12:30 › Post-clustering inference: practical limitations for application to scRNA-seq data-analysis - Boris Hejblum, Inserm Bordeaux Population Health research center U1219  
12:30 - 13:45 Lunch  
13:45 - 15:25 E-values (Amphi H of CLV) - Tristan Mary-Huard (+)  
13:45 - 14:40 › Bringing Closure to False Discovery Rate Control: A General Principle for Multiple Testing - Jelle Goeman, Leiden University  
14:40 - 14:55 › Robust Confidence Intervals for Generalized Linear Models with an application to RNA-Sequencing Data - Andrea Panarotto, Università degli Studi di Padova = University of Padua  
14:55 - 15:10 › High-Dimensional Linear Model Inference with Conditional Resampling for Gene Discovery - Daniela Corbetta, Department of Statistical Sciences, University of Padova  
15:10 - 15:25 › Variable selection in transcriptomics data using knockoffs in a classification framework - Julie Cartier, Centre de Bioinformatique, Institut Curie, Oncologie Computationnelle (U1331)  
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